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@AllenInstitute

Allen Institute

Please visit http://alleninstitute.github.io/ for more information.

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  1. AllenSDK AllenSDK Public

    code for reading and processing Allen Institute for Brain Science data

    Jupyter Notebook 402 166

  2. dipde dipde Public

    Numerical solver for coupled population density equations

    Python 27 16

Repositories

Showing 10 of 527 repositories
  • npc_lims Public

    Tools to fetch and update paths, metadata and state for Mindscope Neuropixels sessions, in the cloud.

    AllenInstitute/npc_lims's past year of commit activity
    Python 0 MIT 1 5 2 Updated Nov 9, 2026
  • MultiTaskMPN Public
    AllenInstitute/MultiTaskMPN's past year of commit activity
    Python 2 2 0 0 Updated Nov 10, 2026
  • render-python Public

    A python interface for render

    AllenInstitute/render-python's past year of commit activity
    Python 8 BSD-2-Clause 12 16 1 Updated Nov 9, 2026
  • OCS-Submission-Capsule-API Public
    AllenInstitute/OCS-Submission-Capsule-API's past year of commit activity
    Python 0 0 0 0 Updated Nov 9, 2026
  • human_patchseq_excitatory Public

    Supporting code and data for human glutamatergic Patch-seq manuscript.

    AllenInstitute/human_patchseq_excitatory's past year of commit activity
    Jupyter Notebook 3 0 0 0 Updated Nov 9, 2026
  • biofile-finder Public

    An open-use web application created for easy access, collaboration, and sharing of datasets through rich metadata search, filter, sort, and direct viewing in common industry applications or in our web-based 3D Volume Viewer.

    AllenInstitute/biofile-finder's past year of commit activity
    TypeScript 22 BSD-3-Clause 10 52 9 Updated Nov 9, 2026
  • jem Public

    Repository containing JEM (JSON Electrophysiology Metadata), a web-form for logging metadata during slice electrophysiology experiments.

    AllenInstitute/jem's past year of commit activity
    HTML 5 4 0 0 Updated Nov 9, 2026
  • SPOCTT Public

    Tools, tutorials, and resources associated with the SPOCTT initiative (Scientific and Public Outreach of Cell Type Taxonomies)

    AllenInstitute/SPOCTT's past year of commit activity
    Jupyter Notebook 15 BSD-3-Clause 3 0 0 Updated Nov 9, 2026
  • aibs-informatics-cdk-lib Public

    Library for AWS CDK Constructs related to AIBS Informatics Services

    AllenInstitute/aibs-informatics-cdk-lib's past year of commit activity
    Python 1 0 1 6 Updated Nov 9, 2026
  • ZeroMQ-XOP Public

    The ZeroMQ XOP enables Igor Pro to interface over the network using a ZeroMQ messaging layer and JSON as message format

    AllenInstitute/ZeroMQ-XOP's past year of commit activity
    C 10 BSD-3-Clause 8 12 (1 issue needs help) 1 Updated Nov 9, 2026
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