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1. ida-mdc/pixel-patrol ida-mdc/pixel-patrol Public

   Scientific Dataset Quality Control and Data Exploration Tool

   Jupyter Notebook 29 2

2. Covid-Assembly Covid-Assembly Public

   Project 2 from SC2 @ FUB - Snakemake implementation to compare Illumina and Nanopore sequence assembly quality of the same sample.

   Python

3. album-app/album album-app/album Public

   Mirror of gitlab.com/album-app/album: framework for sharing and replicably running scientific routines, website https://album.solutions

   Python 3

4. CV CV Public

   segXray - Bounding box prediction for 14 different findings in chest X-ray images

   Jupyter Notebook 1

5. maxlight maxlight Public

   Connect a <cheap LED-strip on a 4$ Arduino Nano clone> via USB to your computer and have the mean screen color (or accents) as a room light in real time. Can easily capture and display ~60fps on th…

   C++ 9 1

6. orgaSeg orgaSeg Public

   Pipeline meant to segment and classify organoids, or any other blob-like structures (star-convex polygons). Microscopy images can be easily annotated in QuPath and automatically processed afterward…

   Python 2