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@mims-harvard

Artificial Intelligence for Medicine and Science @ Harvard Zitnik Lab

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  1. TDC TDC Public

    Therapeutics Commons (TDC): Multimodal Foundation for Therapeutic Science

    Jupyter Notebook 1.3k 227

  2. ToolUniverse ToolUniverse Public

    Democratizing AI scientists with ToolUniverse

    Python 1.8k 267

  3. TxAgent TxAgent Public

    TxAgent: An AI Agent for Therapeutic Reasoning Across a Universe of Tools

    Python 655 104

  4. UniTS UniTS Public

    A unified multi-task time series model.

    Python 648 99

  5. ATOMICA ATOMICA Public

    Learning Universal Representations of Intermolecular Interactions with ATOMICA

    Python 229 32

  6. AutoScientists AutoScientists Public

    AutoScientists: Self-Organizing Agent Teams for Long-Running Scientific Experimentation

    Python 779 125

Repositories

Showing 10 of 79 repositories
  • GUIDER Public

    Latent Decision Flow Rewards for Clinical Guideline Reasoning

    mims-harvard/GUIDER's past year of commit activity
    Python 2 1 0 0 Updated Oct 20, 2026
  • ToolUniverse Public

    Democratizing AI scientists with ToolUniverse

    mims-harvard/ToolUniverse's past year of commit activity
    Python 1,753 Apache-2.0 267 9 8 Updated Oct 19, 2026
  • CONCERT Public

    Generative modeling of spatially resolved perturbation responses with CONCERT

    mims-harvard/CONCERT's past year of commit activity
    Jupyter Notebook 27 MIT 3 3 0 Updated Oct 18, 2026
  • mims-harvard.github.io Public

    Lab website

    mims-harvard/mims-harvard.github.io's past year of commit activity
    HTML 3 1 0 0 Updated Oct 17, 2026
  • AutoScientists Public

    AutoScientists: Self-Organizing Agent Teams for Long-Running Scientific Experimentation

    mims-harvard/AutoScientists's past year of commit activity
    Python 779 125 6 6 Updated Oct 15, 2026
  • StratCP Public

    Act or Defer: Error-Controlled Decision Policies for Medical Foundation Models

    mims-harvard/StratCP's past year of commit activity
    Python 10 MIT 3 0 0 Updated Oct 14, 2026
  • bio-mirage Public

    When do biological reasoning models use their biological inputs? Strong benchmark performance can create a mirage of reliance on biological foundation model representations, even when those representations contribute little to task performance.

    mims-harvard/bio-mirage's past year of commit activity
    Python 8 MIT 0 0 0 Updated Oct 5, 2026
  • MT-InfoSeek Public

    Do LLMs Know What to Ask and When? Evaluating Multi-Turn Information Seeking

    mims-harvard/MT-InfoSeek's past year of commit activity
    Python 9 1 0 0 Updated Oct 2, 2026
  • OptimusKG Public

    A modern multimodal knowledge graph with type-specific metadata across biomedical domains.

    mims-harvard/OptimusKG's past year of commit activity
    Python 148 MIT 15 3 2 Updated Sep 21, 2026
  • Madrigal Public

    Madrigal: Multimodal AI predicts clinical outcomes of drug combinations from preclinical data

    mims-harvard/Madrigal's past year of commit activity
    Jupyter Notebook 45 MIT 8 1 0 Updated Sep 19, 2026
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