Electronic Health Record Analysis with Python.
Mapping the MIMIC-III database to the OMOP schema
OMOP2OBO: A Python Library for mapping OMOP standardized clinical terminologies to Open Biomedical Ontologies
A web application to find patients, build cohorts and visualize health records
OMOP standardization pipeline for ICU databases
Data2Evidence is an end-to-end solution for management and analysis of OMOP data - https://data2evidence.org
eds-scikit is a Python library providing tools to process and analyse OMOP data
Extracting Patients' information from clinical notes and export them to an OMOP CDM database.
The PEDSnet Data Quality Assessment Toolkit (OMOP CDM)
Semantic search engine for OHDSI vocabulary
ETL engine to transform openEHR into OMOP. Loads OMOCL configuration files.
Repository for Disease Progression Modeling workbench 360 - An end-to-end deep learning model training framework in python on OMOP data
An ETL pipeline to transform your EMP data to OMOP.
omopcept : an R package to access OMOP conCEPTs (no cons!) and flexible tidyverse compatible R functions for querying and visualising.
Research with the National Clinical Cohort Collaborative (N3C)
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