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@umccr

UMCCR

University of Melbourne Centre for Cancer Research

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  1. htsget-rs htsget-rs Public

    A server implementation of the htsget protocol for bioinformatics in Rust

    Rust 59 9

  2. infrastructure infrastructure Public

    Infrastructure as Code at UMCCR

    Python 11 8

  3. cwl-ica cwl-ica Public

    A collection of cwl-ica workflows along with a user guide for the commands to use and contributions guide

    Common Workflow Language 13 2

  4. orcabus orcabus Public

    OrcaBus is expanding to https://github.com/orcabus

    Python 5

  5. RNAsum RNAsum Public

    Pipeline for generating RNAseq-based cancer patient reports

    R 15 8

Repositories

Showing 10 of 141 repositories
  • cwl-ica-cli Public

    The CLI used for creating/syncing CWL workflows from GitHub to ICAv1

    umccr/cwl-ica-cli's past year of commit activity
    Python 1 MIT 0 12 0 Updated Oct 22, 2026
  • orcahouse-doc Public

    📘 Warehouse Documentation

    umccr/orcahouse-doc's past year of commit activity
    HTML 0 0 0 0 Updated Oct 22, 2026
  • orcahouse-ui Public

    The UI for the OrcaHouse project.

    umccr/orcahouse-ui's past year of commit activity
    TypeScript 0 MIT 0 0 0 Updated Oct 21, 2026
  • hts-specs Public Forked from samtools/hts-specs

    Specifications of SAM/BAM and related high-throughput sequencing file formats

    umccr/hts-specs's past year of commit activity
    TeX 0 187 0 0 Updated Oct 21, 2026
  • docs-platform Public

    Infrastructure and tooling for the UMCCR internal documentation platform at docs.umccr.org.

    umccr/docs-platform's past year of commit activity
    TypeScript 0 0 0 0 Updated Oct 21, 2026
  • orcahouse Public

    🐳 UMCCR Pipeline & Workflow Data Warehouse

    umccr/orcahouse's past year of commit activity
    HCL 0 0 0 0 Updated Oct 21, 2026
  • infrastructure Public

    Infrastructure as Code at UMCCR

    umccr/infrastructure's past year of commit activity
    Python 11 8 16 4 Updated Oct 21, 2026
  • orcasonar Public
    umccr/orcasonar's past year of commit activity
    0 0 1 1 Updated Oct 21, 2026
  • libica Public

    🐍 Python SDK for Illumina BioInsight Platform Core 🐉

    umccr/libica's past year of commit activity
    Python 5 MIT 4 0 0 Updated Oct 21, 2026
  • terraform-provider-remscontent Public

    A Terraform provider to manage the *content* of a REMS instance

    umccr/terraform-provider-remscontent's past year of commit activity
    Go 0 MPL-2.0 0 4 3 Updated Oct 19, 2026
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